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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs57170831 chr7:16480528 T/C 1.93E-10 472 15.13 17.03 18.82 KM Plot
THCA rs57195665 chr5:140803241 C/A 7.54E-7 489 15.98 15.25 21.33 KM Plot
THCA rs57201573 chr11:77955437 CAAAA/C 2.4E-5 487 16.4 15.3 12.47 KM Plot
THCA rs57210488 chr2:201706347 G/A 0 470 16.6 14.77 2.47 KM Plot
THCA rs57212582 chr2:201889098 G/A 0.000137 487 16.07 16.3 4.33 KM Plot
THCA rs572180 chr1:74749199 G/T 8.72E-5 490 15.8 16.8 14.7 KM Plot
THCA rs57257258 chr10:81844020 T/C 0.000145 488 15.97 16.07 9.77 KM Plot
THCA rs57335685 chr3:52098458 C/T 7.35E-5 479 15.93 14.9 17.72 KM Plot
THCA rs57347651 chr11:62575905 GAA/G 9.01E-5 488 16.22 14 14.27 KM Plot
THCA rs573673 chr11:66408071 G/C 0.000219 488 16.3 14.38 14.9 KM Plot
THCA rs57406479 chr19:43583294 G/A 0.000256 485 15.32 18.3 10.08 KM Plot
THCA rs57427365 chr1:41673582 G/C 2.8E-7 490 14.92 17.77 17.47 KM Plot
THCA rs57435615 chr2:237990742 C/CA 0.000204 481 15.23 16.47 16.48 KM Plot
THCA rs57440801 chr18:24517452 A/G 4.2E-9 487 15.7 17.13 17.28 KM Plot
THCA rs5744222 chr11:112037014 G/T 3.71E-5 486 15.97 16.27 12.37 KM Plot